BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB032E01LP1|AL429574
(877 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1743 1665 0.0
>3x_Contig1743
Length = 20172
Score = 1665 bits (838), Expect = 0.0
Identities = 868/878 (98%), Gaps = 2/878 (0%)
Strand = Plus / Minus
Query: 1 atcagtagatatttattgagctgaccatgcagtatttgaatatgtttaacggacaattac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8277 atcagtagatatttattgagctgaccatgcagtatttgaatatgtttaacggacaattac 8218
Query: 61 agatgtcatgtgcggttaaagtctgccacaagtaggaattgaccaacatcgttctgcgcg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8217 agatgtcatgtgcggttaaagtctgccacaagtaggaattgaccaacatcgttctgcgcg 8158
Query: 121 gagatacagtcatcctcatattggtgatgaaagcttactgatctgcgttctacaaggaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8157 gagatacagtcatcctcatattggtgatgaaagcttactgatctgcgttctacaaggaat 8098
Query: 181 aactagtggtatattcattttcttcattcacgtgactggacttatgggatgtcccagtgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8097 aactagtggtatattcattttcttcattcacgtgactggacttatgggatgtcccagtgt 8038
Query: 241 gcagaagtagaggttggaaagatacatacatttcggttaacggctaatcatgaggggttt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8037 gcagaagtagaggttggaaagatacatacatttcggttaacggctaatcatgaggggttt 7978
Query: 301 gtaaaggtatatggcagatgtacatagttaaatacaagccatatcgcttcaattacattc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7977 gtaaaggtatatggcagatgtacatagttaaatacaagccatatcgcttcaattacattc 7918
Query: 361 tgtcgacatcgacggttttcaggtaaaanatcggaccatcttagcgtctaaatagtttat 420
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 7917 tgtcgacatcgacggttttcaggtaaaaaatcggaccatcttagcgtctaaatagtttat 7858
Query: 421 gcgcctttttgagagtttcttttacatcgaccaaaacatggcagtttcagataattaggt 480
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7857 gcgcctttttgagagtatcttttacatcgaccaaaacatggcagtttcagataattaggt 7798
Query: 481 gtcataaatgattactgtwcacgtgacttgtatcacgtgtgcgtgagttttttttttctg 540
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 7797 gtcataaatgattactgtacacgtgacttgtatcacgtgtgcgtgagttttttttttctg 7738
Query: 541 ttttccttcgcgcttcgttggaggagaaggtcggggccggcctaacaccattacctagga 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7737 ttttccttcgcgcttcgttggaggagaaggtcggggccggcctaacaccattacctagga 7678
Query: 601 ccggaccaagggcgtagacggcatcttcggaccgagtcggaggacgtgaccacaaggagt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7677 ccggaccaagggcgtagacggcatcttcggaccgagtcggaggacgtgaccacaaggagt 7618
Query: 661 tcagtgcaaagggaatcattgaaaggtgattaccgctgactggcgccgaatgsm-anaaa 719
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 7617 tcagtgcaaagggaatcattgaaaggtgattaccgctgactggcgccgaatggcgcaaaa 7558
Query: 720 ctcgtatataatgcggtattccagagcccactctgattcctcgaacaagtcagatccaaa 779
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7557 atcgtatataatgcggtattccagagcccactctgattcctcgaacaagtcagatccaaa 7498
Query: 780 tttttaaggttttcgtatgtgctttcattgtttctacaatgctattctactttttgaaag 839
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 7497 tttttaaggttttcgtatgtgc-ttcattgtttctacaatgctattctactttttgaaag 7439
Query: 840 catttcacaacgtcgcttctctaacttggaaaaaaagc 877
||||||||||||||||||||||||||||||||||||||
Sbjct: 7438 catttcacaacgtcgcttctctaacttggaaaaaaagc 7401
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6507
Number of Sequences: 1807
Number of extensions: 6507
Number of successful extensions: 48
Number of sequences better than 1.0e-20: 1
length of query: 877
length of database: 10,358,551
effective HSP length: 16
effective length of query: 861
effective length of database: 10,329,639
effective search space: 8893819179
effective search space used: 8893819179
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)